データセット詳細

Nucleic Acid Drug Database

DB is focused on nucleic acid drugs known as biopharmaceuticals and displayed approval drugs and information on three phases of clinical trial stage.

データセット仕様

タグ	Drug/Chemical RNA Sequence Structure Journal article/Report/Bibliography
提供元	Original
登録区分	Submitted
データ提供者	Molecular Profiling Research Center for Drug Discovery (molprof), The National Institute of Advanced Industrial Science and Technology (AIST)
作成者	Kazuhiko FukuiMolecular Profiling Research Center for Drug Discovery (molprof), The National Institute of Advanced Industrial Science and Technology (AIST) Takayuki AmemiyaMolecular Profiling Research Center for Drug Discovery (molprof), The National Institute of Advanced Industrial Science and Technology (AIST) Hiroshi KounoMolecular Profiling Research Center for Drug Discovery (molprof), The National Institute of Advanced Industrial Science and Technology (AIST)/Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science
公開日	2019-05-14
ライセンス	Attribution-ShareAlike 2.1 Japan (CC BY-SA 2.1)
バージョン	2019-05-14
ダウンロード	https://rdfportal.org/download/nadd
SPARQLエンドポイント	https://rdfportal.org/primary/sparql

データセット統計

Triples: 948

Subjects: 112

Properties: 8

Objects: 568

Classes: 4

SPARQLクエリ例

例 1

エンドポイントで実行

# がんをターゲットとする核酸医薬品の一覧の取得

PREFIX obo: <http://purl.obolibrary.org/obo/>
SELECT ?entry ?disease
WHERE {
    ?entry obo:RO_0002606 ?disease FILTER ( ?disease = obo:MONDO_0005097 || ?disease = obo:MONDO_0005192 || ?disease = obo:MONDO_0005233 || ?disease = obo:MONDO_0005575 || ?disease = obo:MONDO_0007256 || ?disease = obo:MONDO_0008315 ) #Including cancer
}

例 2

エンドポイントで実行

# ターゲット分子の立体構造が解かれている核酸医薬品の一覧の取得

PREFIX PDBr: <https://rdf.wwpdb.org/pdb/>
PREFIX sio: <http://semanticscience.org/resource/>
SELECT ?entry ?molecule
WHERE {
    ?entry sio:SIO_010423 ?molecule FILTER REGEX ( str(?molecule), "pdb")
}