Datasets

MassBank

MassBank is an open-source mass spectral library for the identification of small chemical molecules in metabolomics, exposomics, and environmental research. This RDF dataset provides MassBank data in RDF format.

Dataset specifications

Tags
Compound
Provenance Original
Registration Submitted
Data provider
  • MassBank
Creator
  • Hiroshi TsugawaDepartment of Biotechnology and Life Science, Faculty of Engineering, Tokyo University of Agriculture and Technology
Issued 2025-06-17
Licenses
  • NA
Download https://rdfportal.org/download/massbank
SPARQL Endpoint https://rdfportal.org/primary/sparql

Dataset statistics

Triples
29889091
Subjects
6277391
Properties
37
Objects
8444777
Classes
5

SPARQL example queries

Example 1

Run on Endpoint
#List instruemtn types
PREFIX mbo: <http://www.massbank.jp/ontology/>

SELECT DISTINCT ?instrument_type
WHERE {
  ?s mbo:instrument_type ?instrument_type .
}

Schema diagram

Schema diagram for massbank
Schema diagram for massbank